GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to gltK

Finding the characterized proteins for gltK (L-glutamate ABC transporter, permease component 1 (gltK/aatM)) in L-glutamate catabolism

Or see clustering for step gltK

Or see all steps for L-glutamate catabolism

Or cluster curated proteins matching a keyword

Definition of gltK

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 7 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for gltK.)

TC 3.A.1.3.17 / Q8YSA2 Basic amino acid uptake transporter, BgtAB
PFams: SBP_bac_3, Lig_chan-Glu_bd, BPD_transp_1
501 amino acids: PaperBLAST, CDD, TCDB::Q8YSA2
40% identical to

b0653 glutamate/aspartate ABC transporter membrane subunit GltK (EC 7.4.2.1) from Escherichia coli K-12 substr. MG1655
GLTK_ECOLI / P0AER5 Glutamate/aspartate import permease protein GltK from Escherichia coli (strain K12)
TC 3.A.1.3.4 / P0AER5 Glutamate/aspartate transport system permease protein GltK aka B0653, component of Glutamate/aspartate porter from Escherichia coli
P0AER5 glutamate/aspartate ABC transporter membrane subunit GltK (EC 7.4.2.1) from Escherichia coli (strain K12)
PFams: BPD_transp_1
Heteromeric, 224 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for gltK.)

PfGW456L13_4772 ABC transporter for L-Asparagine and possibly other L-amino acids, permease component 2 from Pseudomonas fluorescens GW456-L13
PFams: BPD_transp_1
Heteromeric, 223 amino acids: PaperBLAST, CDD, reanno::pseudo13_GW456_L13:PfGW456L13_4772
97% identical to

Pf1N1B4_773 ABC transporter for L-asparagine and L-glutamate, permease subunit 2 from Pseudomonas fluorescens FW300-N1B4
PFams: BPD_transp_1
Heteromeric, 223 amino acids: PaperBLAST, CDD