GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glpA (glycerol 3-phosphate dehydrogenase subunit A) in glycerol catabolism

Or see other characterized proteins similar to glpA

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of glpA

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 542-586 amino acids (1/3 heteromeric)

The first sequence in each cluster is the seed.

GLPA2_HALVD / D4GQU6 Anaerobic glycerol-3-phosphate dehydrogenase subunit A2; G-3-P dehydrogenase A2; G3PDH A2; EC 1.1.5.3 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
PFams: FAD_binding_3, Pyr_redox_2, DAO, FAD_binding_2, Fer2_BFD
563 amino acids: PaperBLAST, CDD, Compare to cluster

GLPA1_HALVD / D4GYI2 Anaerobic glycerol-3-phosphate dehydrogenase subunit A1; G-3-P dehydrogenase A1; G3PDH A1; EC 1.1.5.3 from Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)
PFams: Pyr_redox_2, DAO, FAD_binding_2, Fer2_BFD
586 amino acids: PaperBLAST, CDD, Compare to cluster

b2241 anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) from Escherichia coli K-12 substr. MG1655
P0A9C0 anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) from Escherichia coli (strain K12)
PFams: FAD_binding_3, DAO, Fer2_BFD
Heteromeric, 542 amino acids: PaperBLAST, CDD, Compare to cluster