GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for glpQ (glycerol ABC transporter, permease component 2 (GlpQ)) in glycerol catabolism

Or see other characterized proteins similar to glpQ

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of glpQ

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 270-273 amino acids (heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.1.35 / G3LHZ1 GlpQ, component of Glycerol uptake porter, GlpSTPQV from Rhizobium leguminosarum bv. viciae
PFams: BPD_transp_1
Heteromeric, 273 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_794 ABC transporter for Glycerol, permease component 2 from Acidovorax sp. GW101-3H11
PFams: BPD_transp_1
Heteromeric, 270 amino acids: PaperBLAST, CDD, Compare to cluster