GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for glpT (glycerol ABC transporter, ATPase component 2 (GlpT)) in glycerol catabolism

Or see other characterized proteins similar to glpT

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of glpT

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 356-358 amino acids (heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.1.35 / G3LHY9 GlpT, component of Glycerol uptake porter, GlpSTPQV from Rhizobium leguminosarum bv. viciae
PFams: ABC_tran, OB_MalK, TOBE_2
Heteromeric, 356 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_792 ABC transporter for Glycerol, ATPase component 2 from Acidovorax sp. GW101-3H11
PFams: ABC_tran, TOBE_2
Heteromeric, 358 amino acids: PaperBLAST, CDD, Compare to cluster