GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for stl1 (glycerol:H+ symporter Stl1p) in glycerol catabolism

Or see other characterized proteins similar to stl1

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of stl1

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 530-569 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

TC 2.A.1.1.38 / P39932 The glycerol:H+ symporter, Stl1p from Saccharomyces cerevisiae (Baker's yeast)
RF|NP_010825.1 sugar transporter STL1 from Saccharomyces cerevisiae
PFams: Sugar_tr, MFS_1
569 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.1.1.73 / Q5A8J5 Glycerol uptake permease (Glycerol:H+ symporter) Stl1. (Involved in salt stress relief) (Kayingo et al. 2009) (similar to Stl1 of S. cerevisiae (2.A.1.1.38)) from Candida albicans
CH_122745 glycerol permease from Candida albicans
PFams: Sugar_tr, MFS_1
546 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.1.1.125 / C4QVV9 Glycerol:H+ symporter of 530 aas and 12 TMSs, GT1 from Komagataella pastoris (strain GS115 / ATCC 20864)
PFams: Sugar_tr, MFS_1
530 amino acids: PaperBLAST, CDD, Compare to cluster