GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to BPHYT_RS24005

Finding the characterized proteins for BPHYT_RS24005 (L-histidine ABC transporter, permease component 1) in L-histidine catabolism

Or see clustering for step BPHYT_RS24005

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of BPHYT_RS24005

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 5 other characterized sequences. (Found 5 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for BPHYT_RS24005.)

TC 3.A.1.3.5 / P0A4N5 Octopine transport system permease protein occQ, component of Octopine porter from Agrobacterium tumefaciens
PFams: BPD_transp_1
Heteromeric, 237 amino acids: PaperBLAST, CDD, TCDB::P0A4N5
52% identical to

B2TBJ7 Polar amino acid ABC transporter, inner membrane subunit; Flags: Precursor
240 amino acids: PaperBLAST, CDD

TC 3.A.1.3.6 / P35118 NocQ aka ATU6026 aka AGR_PTI_66, component of Nopaline porter from Agrobacterium tumefaciens
PFams: BPD_transp_1
Heteromeric, 236 amino acids: PaperBLAST, CDD, TCDB::P35118
51% identical to

B2TBJ7 Polar amino acid ABC transporter, inner membrane subunit; Flags: Precursor
240 amino acids: PaperBLAST, CDD

TC 3.A.1.3.23 / Q9HU30 Probable permease of ABC transporter, component of Amino acid transporter, PA5152-PA5155. Probably transports numerous amino acids including lysine, arginine, histidine, D-alanine and D-valine (Johnson et al. 2008). Regulated by ArgR from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: BPD_transp_1
Heteromeric, 231 amino acids: PaperBLAST, CDD, TCDB::Q9HU30
41% identical to

B2TBJ7 Polar amino acid ABC transporter, inner membrane subunit; Flags: Precursor
240 amino acids: PaperBLAST, CDD

BPHYT_RS07675 ABC transporter for L-Arginine, permease component 2 from Burkholderia phytofirmans PsJN
PFams: BPD_transp_1
Heteromeric, 229 amino acids: PaperBLAST, CDD, reanno::BFirm:BPHYT_RS07675
41% identical to

B2TBJ7 Polar amino acid ABC transporter, inner membrane subunit; Flags: Precursor
240 amino acids: PaperBLAST, CDD

AO356_05500 ABC transporter for L-Lysine, permease component 1 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 242 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_05500
40% identical to

B2TBJ7 Polar amino acid ABC transporter, inner membrane subunit; Flags: Precursor
240 amino acids: PaperBLAST, CDD