GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to BPHYT_RS24010

Finding the characterized proteins for BPHYT_RS24010 (L-histidine ABC transporter, permease component 2) in L-histidine catabolism

Or see clustering for step BPHYT_RS24010

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of BPHYT_RS24010

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 9 other characterized sequences. (Found 9 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for BPHYT_RS24010.)

TC 3.A.1.3.6 / P35113 NocM aka ATU6025 aka AGR_PTI_65, component of Nopaline porter from Agrobacterium tumefaciens
PFams: BPD_transp_1
Heteromeric, 241 amino acids: PaperBLAST, CDD, TCDB::P35113
50% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

TC 3.A.1.3.5 / P35114 OCM1 aka OccM, component of Octopine porter from Agrobacterium tumefaciens
PFams: BPD_transp_1
Heteromeric, 245 amino acids: PaperBLAST, CDD, TCDB::P35114
50% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

PS417_21735 ABC transporter for L-Arginine, permease component 2 from Pseudomonas simiae WCS417
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF4243
43% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

TC 3.A.1.3.11 / O50183 AotP aka AotM aka PA0890, component of Arginine/ornithine (but not lysine) porter from Pseudomonas aeruginosa
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, TCDB::O50183
43% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

AO356_18710 L-Arginine ABC transporter, permease component 1 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_18710
42% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

AO353_03045 ABC transporter for L-Arginine and L-Citrulline, permease component 1 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_03045
42% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

Pf6N2E2_5662 L-Arginine ABC transporter, permease protein AotM from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
232 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_5662
42% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

Pf1N1B4_3433 ABC transporter for L-Arginine and L-Citrulline, permease component 2 from Pseudomonas fluorescens FW300-N1B4
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_3433
42% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD

AO356_09910 ABC transporter for L-Lysine, permease component 2 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 229 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_09910
42% identical to

B2TBJ8 Polar amino acid ABC transporter, inner membrane subunit
250 amino acids: PaperBLAST, CDD