GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to braF

Finding the characterized proteins for braF (ABC transporter for glutamate, histidine, arginine, and other amino acids, ATPase component 1 (BraF)) in L-histidine catabolism

Or see clustering for step braF

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of braF

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 4 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for braF.)

b3455 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655
TC 3.A.1.4.1 / P0A9S7 High-affinity branched-chain amino acid transport ATP-binding protein LivG aka B3455, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli
P0A9S7 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli (strain K12)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD, TCDB::P0A9S7
50% identical to

Q1MCU2 ATP-binding component of a broad range amino acid ABC transporter
292 amino acids: PaperBLAST, CDD

TC 3.A.1.4.8 / P21629 High-affinity branched-chain amino acid transport ATP-binding protein BraF, component of Branched chain amino acid uptake transporter. Transports alanine from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD, TCDB::P21629
49% identical to

Q1MCU2 ATP-binding component of a broad range amino acid ABC transporter
292 amino acids: PaperBLAST, CDD

TC 3.A.1.4.10 / Q8DQH8 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
PFams: AAA_23, ABC_tran, BCA_ABC_TP_C
Heteromeric, 254 amino acids: PaperBLAST, CDD, TCDB::Q8DQH8
45% identical to

Q1MCU2 ATP-binding component of a broad range amino acid ABC transporter
292 amino acids: PaperBLAST, CDD

TC 3.A.1.4.11 / Q6N8W1 Putative branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: BPD_transp_2, ABC_tran, BCA_ABC_TP_C
Heteromeric, 590 amino acids: PaperBLAST, CDD, TCDB::Q6N8W1
44% identical to

Q1MCU2 ATP-binding component of a broad range amino acid ABC transporter
292 amino acids: PaperBLAST, CDD