GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hutU (urocanase) in L-histidine catabolism

Or see other characterized proteins similar to hutU

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of hutU

Fetched 16 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 16 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 551-676 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P25080 urocanase subunit (EC 4.2.1.49) from Pseudomonas putida
HUTU_PSEPU / P25080 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Pseudomonas putida (Arthrobacter siderocapsulatus)
PFams: Urocanase_N, Urocanase, Urocanase_C
557 amino acids: PaperBLAST, CDD, Compare to cluster

P25503 HutU (EC 4.2.1.49) from Bacillus subtilis (strain 168)
HUTU_BACSU / P25503 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Bacillus subtilis (strain 168)
PFams: Urocanase_N, Urocanase, Urocanase_C
552 amino acids: PaperBLAST, CDD, Compare to cluster

HUTU_GEOKA / Q5L084 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Geobacillus kaustophilus (strain HTA426)
PFams: Urocanase_N, Urocanase, Urocanase_C
551 amino acids: PaperBLAST, CDD, Compare to cluster

HUTU_HUMAN / Q96N76 Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Homo sapiens (Human)
PFams: Urocanase_N, Urocanase, Urocanase_C
676 amino acids: PaperBLAST, CDD, Compare to cluster

Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) from Sphingomonas koreensis DSMZ 15582
PFams: Urocanase_N, Urocanase, Urocanase_C
556 amino acids: PaperBLAST, CDD, Compare to cluster

BWI76_RS08735 Urocanate hydratase (EC 4.2.1.49) from Klebsiella michiganensis M5al
PFams: Urocanase_N, Urocanase, Urocanase_C
562 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) from Phaeobacter inhibens BS107
PFams: Urocanase_N, Urocanase, Urocanase_C
559 amino acids: PaperBLAST, CDD, Compare to cluster

Sama_1632 Urocanate hydratase (EC 4.2.1.49) from Shewanella amazonensis SB2B
PFams: Urocanase_N, Urocanase, Urocanase_C
670 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b21163 Urocanate hydratase (EC 4.2.1.49) from Sinorhizobium meliloti 1021
PFams: Urocanase_N, Urocanase, Urocanase_C
557 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_01720 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas simiae WCS417
PFams: Urocanase_N, Urocanase, Urocanase_C
556 amino acids: PaperBLAST, CDD, Compare to cluster

Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) from Acidovorax sp. GW101-3H11
PFams: Urocanase_N, Urocanase, Urocanase_C
574 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens GW456-L13
PFams: Urocanase_N, Urocanase, Urocanase_C
560 amino acids: PaperBLAST, CDD, Compare to cluster

Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens FW300-N1B4
PFams: Urocanase_N, Urocanase, Urocanase_C
560 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_12250 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens FW300-N2E3
PFams: Urocanase_N, Urocanase, Urocanase_C
567 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_09630 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens FW300-N2C3
PFams: Urocanase_N, Urocanase, Urocanase_C
562 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) from Pseudomonas fluorescens FW300-N2E2
PFams: Urocanase_N, Urocanase, Urocanase_C
562 amino acids: PaperBLAST, CDD, Compare to cluster