GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for hutV (L-histidine ABC transporter, ATPase component HutV) in L-histidine catabolism

Or see other characterized proteins similar to hutV

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Definition of hutV

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 275-276 amino acids (heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.12.6 / Q9KKE1 HutV aka HISV aka R02702 aka SMC00670, component of Uptake system for hisitidine, proline, proline-betaine and glycine-betaine from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: ABC_tran
Heteromeric, 275 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_09610 ABC transporter for L-Histidine, ATPase component from Pseudomonas fluorescens FW300-N2C3
PFams: ABC_tran
Heteromeric, 276 amino acids: PaperBLAST, CDD, Compare to cluster