GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for permease (L-histidine permease) in L-histidine catabolism

Or see other characterized proteins similar to permease

Or see all steps for L-histidine catabolism

Or cluster curated proteins matching a keyword

Definition of permease

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Candida albicans

TC 2.A.3.10.20 / P43059 The high affinity basic amino acid (Arg, Lys, His) transporter, Can1 from Candida albicans (Yeast)
PFams: AA_permease, AA_permease_2
571 amino acids: PaperBLAST, CDD (Cluster 1)

Corynebacterium glutamicum

TC 2.A.3.1.12 / Q46065 Aromatic amino acid permease, AroP from Corynebacterium glutamicum (Brevibacterium flavum)
PFams: AA_permease_2, Spore_permease, AA_permease
463 amino acids: PaperBLAST, CDD (Cluster 1)

Lactococcus lactis

HISP_LACLM / A2RI97 Histidine permease HisP from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: AA_permease_2, AA_permease
477 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas fluorescens

AO353_12275 histidine permease from Pseudomonas fluorescens FW300-N2E3
PFams: AA_permease, AA_permease_2
468 amino acids: PaperBLAST, CDD (Cluster 1)

Saccharomyces cerevisiae

HIP1_YEAST / P06775 Histidine permease from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
TC 2.A.3.10.1 / P06775 High affinity histidine permease (also implicated in Mn2+ efflux; Co2+, Ni2+, Zn2+ and Cu2+ uptake) from Saccharomyces cerevisiae (Baker's yeast)
GI|1323339 histidine permease from Saccharomyces cerevisiae
PFams: AA_permease_2, AA_permease
603 amino acids: PaperBLAST, CDD (Cluster 1)

Schizosaccharomyces pombe

TC 2.A.3.10.21 / Q9URZ4 The basic amino acid (canavanine sensitivity) transporter, Cat1 from Schizosaccharomyces pombe (Fission yeast)
RF|NP_595008.2 uncharacterized amino-acid permease C869.11 from Schizosaccharomyces pombe
PFams: AA_permease, AA_permease_2
580 amino acids: PaperBLAST, CDD (Cluster 1)