Other Characterized Proteins Similar to livF

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to livF

Finding the characterized proteins for livF (L-isoleucine ABC transporter, ATPase component 1 (LivF/BraG)) in L-isoleucine catabolism

Or see clustering for step livF

Or see all steps for L-isoleucine catabolism

Or cluster curated proteins matching a keyword

Definition of livF

Curated sequence CH_003736: high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF. LivF aka B3454, component of Leucine; leucine/isoleucine/valine porter. branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF (EC 7.4.2.2). branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF (EC 7.4.2.2)
Curated sequence P21630: High-affinity branched-chain amino acid transport ATP-binding protein BraG, component of Branched chain amino acid uptake transporter. Transports alanine
Curated sequence Q8DQH7: ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM
UniProt sequence Q1MCU3: SubName: Full=ATP-binding component of a broad range amino acid ABC transporter {ECO:0000313|EMBL:CAK09237.1};
UniProt sequence A0A165KC78: SubName: Full=ABC transporter ATP-binding protein {ECO:0000313|EMBL:KZT15317.1};
UniProt sequence A0A159ZWL6: RecName: Full=High-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000256|PIRNR:PIRNR039137};
Comment: E. coli livFGHMJ or livFGHMK (livK and livJ are alternate SBPs). LivJFGHM from Streptococcus pneumoniae. BraCDEFG from Pseudomonas aeruginosa (braC is the SBP). BraDEFG/braC3 from R. leguminosarum; braC3 (RL3540; Q1MDE9) is a secondary SBP that transports leucine/isoleucine/valine/alanine (PMID:19597156); the proximal braC might also transport isoleucine, not sure if this is known, so exclude it (Q9L3M3); LivH/BraD = RL3750/Q1MCU0; LivM/BraE = RL3749/Q1MCU1; LivG/BraF = RL3748/Q1MCU2; LivF/BraG = RL3747/Q1MCU3; LivFGJHM from Acidovorax sp. GW101-3H11: LivF = Ac3H11_1692 (A0A165KC78), LivG = Ac3H11_1693 (A0A165KC86), LivJ = Ac3H11_2396 (A0A165KTD4; not near the other components, but cofit and has the phenotype on isoleucine), LivH = Ac3H11_1695 (A0A165KC95), LivM = Ac3H11_1694 (A0A165KER0); LivKHMGF from Pseudomonas fluorescens FW300-N2E2: LivF = Pf6N2E2_2926 = A0A159ZWL6, LivG = Pf6N2E2_2925 = A0A159ZWS6, LivK = Pf6N2E2_2921 = A0A160A0J6, LivH = Pf6N2E2_2923 = A0A0D9B2B6, LivM = Pf6N2E2_2924 = A0A159ZYE0

Fetched 6 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 9 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for livF.)

TC 3.A.1.4.11 / Q6N8W2 Branched-chain amino acid transport system ATP-binding protein, component of The phenylpropeneoid uptake porter, CouPSTW from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: ABC_tran
Heteromeric, 239 amino acids: PaperBLAST, CDD, TCDB::Q6N8W2
52% identical to

b3454 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655
P22731 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivF (EC 7.4.2.2) from Escherichia coli (strain K12)
TC 3.A.1.4.1 / P22731 LivF aka B3454, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli
GB|AAC76479.2 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF from Escherichia coli K12
PFams: ABC_tran
Heteromeric, 237 amino acids: PaperBLAST, CDD

TC 3.A.1.4.6 / Q8YT15 NatE, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: ABC_tran
Heteromeric, 247 amino acids: PaperBLAST, CDD, TCDB::Q8YT15
49% identical to

A0A159ZWL6 High-affinity branched-chain amino acid transport ATP-binding protein
233 amino acids: PaperBLAST, CDD

TC 3.A.1.4.2 / P73650 NatE aka LivF aka SLR1881, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
PFams: ABC_tran
Heteromeric, 240 amino acids: PaperBLAST, CDD, TCDB::P73650
48% identical to

A0A159ZWL6 High-affinity branched-chain amino acid transport ATP-binding protein
233 amino acids: PaperBLAST, CDD

TC 3.A.1.4.9 / Q0S720 ABC branched-chain amino acid transporter, ATP-binding component, component of Uptake transporter, CamABCD of cholate (steroid) metabolites, 1β(2'-propanoate)-3aα-H-4α(3"(R)-hydroxy-3"-propanoate)-7aβ-methylhexahydro-5-indanone and a desaturated analog from Rhodococcus sp. (strain RHA1)
PFams: ABC_tran
Heteromeric, 245 amino acids: PaperBLAST, CDD, TCDB::Q0S720
41% identical to

TC 3.A.1.4.7 / Q92TN4 Putative branched-chain amino acid uptake ABC transporter ATP-binding protein, component of The protocatechuate (3,4-dihydroxybenzoate) uptake porter, PcaMNVWX from Rhizobium meliloti (strain 1021)
PFams: ABC_tran
Heteromeric, 238 amino acids: PaperBLAST, CDD, TCDB::Q92TN4
40% identical to

TC 3.A.1.4.4 / Q9L3S2 UrtE, component of The high-affinity (<1 μM) urea porter
PFams: ABC_tran
Heteromeric, 273 amino acids: PaperBLAST, CDD, TCDB::Q9L3S2
40% identical to

Q1MCU3 ATP-binding component of a broad range amino acid ABC transporter
247 amino acids: PaperBLAST, CDD