GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for livG (L-isoleucine ABC transporter, ATPase component 2 (LivG/BraF)) in L-isoleucine catabolism

Or see other characterized proteins similar to livG

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Or cluster curated proteins matching a keyword

Definition of livG

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Escherichia coli

b3455 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655
TC 3.A.1.4.1 / P0A9S7 High-affinity branched-chain amino acid transport ATP-binding protein LivG aka B3455, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli
P0A9S7 branched chain amino acid/phenylalanine ABC transporter ATP binding subunit LivG (EC 7.4.2.2) from Escherichia coli (strain K12)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD (Cluster 1)

Organism unknown

A0A159ZWS6 High-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG
255 amino acids: PaperBLAST, CDD (Cluster 1)

A0A165KC86 ABC transporter ATP-binding protein
260 amino acids: PaperBLAST, CDD (Cluster 1)

Q1MCU2 ATP-binding component of a broad range amino acid ABC transporter
292 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas aeruginosa

TC 3.A.1.4.8 / P21629 High-affinity branched-chain amino acid transport ATP-binding protein BraF, component of Branched chain amino acid uptake transporter. Transports alanine from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: ABC_tran, BCA_ABC_TP_C
Heteromeric, 255 amino acids: PaperBLAST, CDD (Cluster 1)

Streptococcus pneumoniae

TC 3.A.1.4.10 / Q8DQH8 ABC transporter ATP-binding protein-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
PFams: AAA_23, ABC_tran, BCA_ABC_TP_C
Heteromeric, 254 amino acids: PaperBLAST, CDD (Cluster 1)