GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to livJ

Finding the characterized proteins for livJ (L-isoleucine ABC transporter, substrate-binding component (LivJ/LivK/BraC/BraC3)) in L-isoleucine catabolism

Or see clustering for step livJ

Or see all steps for L-isoleucine catabolism

Or cluster curated proteins matching a keyword

Definition of livJ

Fetched 7 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 5 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for livJ.)

TC 3.A.1.4.3 / Q9L3M3 BraC, component of General L- (and D-)amino acid uptake porter (transports acidic, basic, polar, semipolar and hydrophobic amino acids). The amino and carboxyl groups do not need to be α since γ-aminobutyric acid (GABA) is a substrate. The system may function with additional binding proteins since L-alanine uptake is not dependent on BraC from Rhizobium leguminosarum (biovar viciae)
PFams: Peripla_BP_6, Peripla_BP_5, ANF_receptor
Heteromeric, 381 amino acids: PaperBLAST, CDD, TCDB::Q9L3M3
45% identical to

Q1MDE9 Solute-binding (Aliphatic amino acid) component of ABC transporter
367 amino acids: PaperBLAST, CDD