Other Characterized Proteins Similar to natB

Finding the characterized proteins for natB (L-isoleucine ABC transporter, substrate-binding component NatB) in L-isoleucine catabolism

Or see clustering for step natB

Or see all steps for L-isoleucine catabolism

Or cluster curated proteins matching a keyword

Definition of natB

• Ignore hits to Q55387 when looking for 'other' hits (NatB aka SLR0559, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE)
• Curated sequence Q8YVY4: NatB, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 2 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for natB.)

TC 3.A.1.4.2 / Q55387 NatB aka SLR0559, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
PFams: Peripla_BP_6, Peripla_BP_5, ANF_receptor
Heteromeric, 454 amino acids: PaperBLAST, CDD, TCDB::Q55387
60% identical to

TC 3.A.1.4.6 / Q8YVY4 NatB, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: Peripla_BP_5, Peripla_BP_6, ANF_receptor
Heteromeric, 441 amino acids: PaperBLAST, CDD