GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to natD

Finding the characterized proteins for natD (L-isoleucine ABC transporter, permease component 2 (NatD)) in L-isoleucine catabolism

Or see clustering for step natD

Or see all steps for L-isoleucine catabolism

Or cluster curated proteins matching a keyword

Definition of natD

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Software error:

Error running
../bin/usearch -ublast /tmp/cluratedClusters.1791578.faa -db ../tmp/path.carbon/curated.faa.udb -evalue 0.001 -blast6out /tmp/cluratedClusters.1791578.close -threads 8 -quiet -id 0.4 -query_cov 0.7
-- Inappropriate ioctl for device at /opt/apache/vhosts/genomics.lbl.gov/papers/Genomics/cgi/curatedClusters.cgi line 449.

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