GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to ofoB

Finding the characterized proteins for ofoB (branched-chain alpha-ketoacid:ferredoxin oxidoreductase, beta subunit OfoB) in L-isoleucine catabolism

Or see clustering for step ofoB

Or see all steps for L-isoleucine catabolism

Or cluster curated proteins matching a keyword

Definition of ofoB

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 7 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for ofoB.)

Q9AJL9 2-oxoglutarate ferredoxin oxidoreductase β subunit (EC 1.2.7.3) from Hydrogenobacter thermophilus
Q9AJL9 2-oxoglutarate synthase (subunit 1/2) (EC 1.2.7.3) from Hydrogenobacter thermophilus
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 295 amino acids: PaperBLAST, CDD, metacyc::MONOMER-11845
43% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for ofoB.)

OFOB1_SULTO / Q96Y68 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii)
Q96Y68 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfurisphaera tokodaii
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD, SwissProt::Q96Y68
99% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD

OFOB_SACSO / A0A0E3KBH3 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Saccharolobus solfataricus (Sulfolobus solfataricus)
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD, SwissProt::A0A0E3KBH3
76% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD

OFOB2_SULTO / Q96XT4 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii)
Q96XT4 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfurisphaera tokodaii
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 304 amino acids: PaperBLAST, CDD, SwissProt::Q96XT4
71% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD

OFOB1_AERPE / Q9YA11 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 318 amino acids: PaperBLAST, CDD, SwissProt::Q9YA11
63% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD

OFOB2_AERPE / Q9YBX8 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 309 amino acids: PaperBLAST, CDD, SwissProt::Q9YBX8
54% identical to

P72579 2-oxoacid:ferredoxin oxidoreductase β subunit (EC 1.2.7.11; EC 1.2.7.1; EC 1.2.7.3; EC 1.2.7.7) from Sulfolobus sp.
OFOB_SULSP / P72579 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.
P72579 2-oxoacid oxidoreductase (ferredoxin) (subunit 1/2) (EC 1.2.7.11) from Sulfolobus sp.
PFams: TPP_enzyme_C, PFO_beta_C
Heteromeric, 305 amino acids: PaperBLAST, CDD