GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for edd (phosphogluconate dehydratase) in lactose catabolism

Or see other characterized proteins similar to edd

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of edd

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Escherichia coli

b1851 phosphogluconate dehydratase (EC 4.2.1.12) from Escherichia coli K-12 substr. MG1655
P0ADF6 phosphogluconate dehydratase (EC 4.2.1.12) from Escherichia coli (strain K12)
EDD_ECOLI / P0ADF6 Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; Entner-Doudoroff dehydrase; EC 4.2.1.12 from Escherichia coli (strain K12)
RF|NP_416365 phosphogluconate dehydratase from Escherichia coli K12
PFams: ILVD_EDD
603 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas chlororaphis

Q1PAG1 phosphogluconate dehydratase (EC 4.2.1.12) from Pseudomonas chlororaphis
PFams: ILVD_EDD
608 amino acids: PaperBLAST, CDD (Cluster 1)

Zymomonas mobilis

EDD_ZYMMO / P21909 Phosphogluconate dehydratase; 6-phosphogluconate dehydratase; EC 4.2.1.12 from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
PFams: ILVD_EDD
607 amino acids: PaperBLAST, CDD (Cluster 1)