GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lacB' (periplasmic lactose 3-dehydrogenase, cytochrome c component (LacB)) in lactose catabolism

Or see other characterized proteins similar to lacB'

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Or cluster curated proteins matching a keyword

Definition of lacB'

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Caulobacter crescentus

CCNA_01704 lacB: cytochrome c2 component of periplasmic glucoside 3-dehydrogenase (EC 1.1.99.13) from Caulobacter crescentus NA1000
PFams: Cytochrome_CBB3, Cytochrom_C
Heteromeric, 120 amino acids: PaperBLAST, CDD (Singleton 1)

Pedobacter GW460-11-11-14-LB5

CA265_RS15360 predicted cytochrome c component of periplasmic glucoside 3-dehydrogenase (EC 1.1.99.13) from Pedobacter sp. GW460-11-11-14-LB5
PFams: Cytochrom_C
Heteromeric, 127 amino acids: PaperBLAST, CDD (Singleton 2)