GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lacD (D-tagatose-1,6-bisphosphate aldolase (monomeric)) in lactose catabolism

Or see other characterized proteins similar to lacD

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of lacD

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 326-326 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q5HE13 tagatose-bisphosphate aldolase (EC 4.1.2.40) from Staphylococcus aureus
P0A010 D-tagatose-1,6-diphosphate aldolase (EC 4.1.2.40) from Staphylococcus aureus (strain N315)
PFams: DUF2090, DeoC
326 amino acids: PaperBLAST, CDD, Compare to cluster

LACD_LACLL / P26593 Tagatose 1,6-diphosphate aldolase; D-tagatose-1,6-bisphosphate aldolase; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Lactococcus lactis subsp. lactis (Streptococcus lactis)
PFams: DeoC
326 amino acids: PaperBLAST, CDD, Compare to cluster