GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for lacG (lactose ABC transporter, permease component 2) in lactose catabolism

Or see other characterized proteins similar to lacG

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of lacG

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 272-273 amino acids (heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.1.4 / P29824 LacG, component of Lactose porter from Agrobacterium radiobacter
PFams: BPD_transp_1
Heteromeric, 273 amino acids: PaperBLAST, CDD, Compare to cluster

SM_b21654 ABC transporter for Lactose, permease component 2 from Sinorhizobium meliloti 1021
PFams: BPD_transp_1
Heteromeric, 272 amino acids: PaperBLAST, CDD, Compare to cluster