Clustering the characterized proteins for lacIICB (lactose PTS system, fused EIIC and EIIB components) in lactose catabolism
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Definition of lacIICB
Fetched 5 sequences
Running BLASTp
Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences
Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster
PTLCB_LACCA / P24400 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lactobacillus casei
PFams: PTS_EIIC, PTS_IIB
577 amino acids: PaperBLAST, CDD (Cluster 1)
TC 4.A.3.1.3 / Q045H3 PTS system lactose-specific IIB component, Lac family / PTS system lactose-specific IIC component, Lac family, component of Lactose PTS group translocator #2, IIA/IICB from Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
PFams: PTS_EIIC, PTS_IIB
Heteromeric, 565 amino acids: PaperBLAST, CDD (Cluster 1)
TC 4.A.3.1.2 / Q045X3 PTS system lactose-specific IIB component, Lac family / PTS system lactose-specific IIC component, Lac family, component of Lactose PTS group translocator #1, IIA/IICB from Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
PFams: PTS_EIIC, PTS_IIB
Heteromeric, 567 amino acids: PaperBLAST, CDD (Cluster 1)
PTLCB_LACLL / P23531 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lactococcus lactis subsp. lactis (Streptococcus lactis)
PFams: PTS_EIIC, PTS_IIB
568 amino acids: PaperBLAST, CDD (Cluster 1)
PTLCB_STAAU / P11162 PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Staphylococcus aureus
TC 4.A.3.1.1 / P11162 PtlB aka LACE, component of Lactose (Lac) porter, LacEF from Staphylococcus aureus
PFams: PTS_EIIC, PTS_IIB
Heteromeric, 570 amino acids: PaperBLAST, CDD (Cluster 1)