GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for lacM (heteromeric lactase, small subunit) in lactose catabolism

Or see other characterized proteins similar to lacM

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of lacM

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Lactobacillus acidophilus

A0SWS4 beta-galactosidase (EC from Lactobacillus acidophilus
PFams: Bgal_small_N
316 amino acids: PaperBLAST, CDD (Cluster 1)

Lactobacillus helveticus

BGAM_LACHE / Q7WTB3 Beta-galactosidase small subunit; Beta-gal small subunit; Lactase small subunit; EC from Lactobacillus helveticus (Lactobacillus suntoryeus)
PFams: Bgal_small_N
Heteromeric, 318 amino acids: PaperBLAST, CDD (Cluster 1)

Lactobacillus reuteri

Q19R71 beta-galactosidase (EC from Lactobacillus reuteri
PFams: Bgal_small_N
319 amino acids: PaperBLAST, CDD (Cluster 1)