GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for pbgal (phospho-beta-galactosidase) in lactose catabolism

Or see other characterized proteins similar to pbgal

Or see all steps for lactose catabolism

Or cluster curated proteins matching a keyword

Definition of pbgal

Fetched 13 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 13 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 467-484 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

AAA16450.1 6-P-β-galactosidase (LacG) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
468 amino acids: PaperBLAST, CDD, Compare to cluster

P11175 phospho-β-galactosidase (EC 3.2.1.85) from Staphylococcus aureus
AAA26650.1 6-P-β-galactosidase (SAV2189) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
470 amino acids: PaperBLAST, CDD, Compare to cluster

AAD15134.1 6-P-β-galactosidase (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
474 amino acids: PaperBLAST, CDD, Compare to cluster

AAN59144.1 6-P-β-galactosidase (LacG;SMU.1490) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
468 amino acids: PaperBLAST, CDD, Compare to cluster

ABJ59750.1 6-P-β-galactosidase (LacG1;LGAS_0344) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
484 amino acids: PaperBLAST, CDD, Compare to cluster

ABJ59900.1 6-P-β-galactosidase (LacG2;LGAS_0502) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
475 amino acids: PaperBLAST, CDD, Compare to cluster

ABV10357.1 6-P-β-galactosidase (LacG;SGO_1512) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
468 amino acids: PaperBLAST, CDD, Compare to cluster

W8QF82 6-phospho-beta-galactosidase (EC 3.2.1.85) from Geobacillus stearothermophilus
AHL67640.1 6-P-β-galactosidase (Gan1D) (EC 3.2.1.86) (see protein)
PFams: Glyco_hydro_1
478 amino acids: PaperBLAST, CDD, Compare to cluster

BAA07122.1 6-P-β-galactosidase (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
473 amino acids: PaperBLAST, CDD, Compare to cluster

BAD76141.1 6-phospho-β-glycosidase (GK1856) (EC 3.2.1.85|3.2.1.86) (see protein)
PFams: Glyco_hydro_1
470 amino acids: PaperBLAST, CDD, Compare to cluster

BAD77499.1 6-phospho-β-glycosidase (GK3214) (EC 3.2.1.85|3.2.1.86) (see protein)
PFams: Glyco_hydro_1
478 amino acids: PaperBLAST, CDD, Compare to cluster

LACG_LEPBD / C7N8L9 6-phospho-beta-galactosidase; Beta-D-phosphogalactoside galactohydrolase; PGALase; P-beta-Gal; PBG; EC 3.2.1.85 from Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b)
PFams: Glyco_hydro_1
467 amino acids: PaperBLAST, CDD, Compare to cluster

LACG_LACLL / P11546 6-phospho-beta-galactosidase; Beta-D-phosphogalactoside galactohydrolase; PGALase; P-beta-Gal; PBG; EC 3.2.1.85 from Lactococcus lactis subsp. lactis (Streptococcus lactis)
AAA25183.1 6-P-β-galactosidase (LacG) (EC 3.2.1.85) (see protein)
PFams: Glyco_hydro_1
468 amino acids: PaperBLAST, CDD, Compare to cluster