GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for brnQ (L-leucine:Na+ symporter BrnQ/BraB) in L-leucine catabolism

Or see other characterized proteins similar to brnQ

Or see all steps for L-leucine catabolism

Or cluster curated proteins matching a keyword

Definition of brnQ

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 437-439 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b0401 branched chain amino acid transporter BrnQ from Escherichia coli K-12 substr. MG1655
P0AD99 branched chain amino acid transporter BrnQ from Escherichia coli (strain K12)
TC 2.A.26.1.10 / P0AD99 Branched chain amino acid transporter 2 of 439 aas and 12 TMSs, BrnQ from Escherichia coli (strain K12)
PFams: Branch_AA_trans
439 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.26.1.1 / P19072 Branched chain amino acid: Na+ symporter from Pseudomonas aeruginosa
PFams: Branch_AA_trans
437 amino acids: PaperBLAST, CDD, Compare to cluster