GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for natB (L-leucine ABC transporter, substrate-binding component NatB) in L-leucine catabolism

Or see other characterized proteins similar to natB

Or see all steps for L-leucine catabolism

Or cluster curated proteins matching a keyword

Definition of natB

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 441-454 amino acids (heteromeric)

The first sequence in each cluster is the seed.

TC 3.A.1.4.2 / Q55387 NatB aka SLR0559, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
PFams: Peripla_BP_6, Peripla_BP_5, ANF_receptor
Heteromeric, 454 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.4.6 / Q8YVY4 NatB, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)
PFams: Peripla_BP_5, Peripla_BP_6, ANF_receptor
Heteromeric, 441 amino acids: PaperBLAST, CDD, Compare to cluster