GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for Slc7a1 (L-lysine transporter Slc7a1) in L-lysine catabolism

Or see other characterized proteins similar to Slc7a1

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Or cluster curated proteins matching a keyword

Definition of Slc7a1

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 618-657 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

CTR3_MOUSE / P70423 Cationic amino acid transporter 3; CAT-3; CAT3; Cationic amino acid transporter y+; Solute carrier family 7 member 3 from Mus musculus (Mouse)
TC 2.A.3.3.5 / P70423 The brain L-cationic (Arg, Lys, Orn, 2,4-diamino-n-butyrate) transporter, CAT3 (capacity of trans-stimulation by internal Arg) from Mus musculus (Mouse)
GI|123218479 Cationic amino acid transporter 3 from Mus musculus
PFams: AA_permease_2, AA_permease, AA_permease_C
618 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.3.3.2 / P18581 Low affinity basic amino acid transporter (CAT2) (T-cell early activation protein (TEA)) (transports arginine, lysine and ornithine; Na+-independent) from Mus musculus (Mouse)
RF|NP_031540.2 low affinity cationic amino acid transporter 2 from Mus musculus
PFams: AA_permease_2, AA_permease, AA_permease_C
657 amino acids: PaperBLAST, CDD, Compare to cluster

SL7A1_MOUSE / Q09143 High affinity cationic amino acid transporter 1; CAT-1; CAT1; Ecotropic retroviral leukemia receptor; Ecotropic retrovirus receptor; ERR; Solute carrier family 7 member 1; System Y+ basic amino acid transporter from Mus musculus (Mouse)
TC 2.A.3.3.1 / Q09143 System Y+ high affinity basic amino acid transporter (CAT1) (ecotropic retrovival leukemia virus receptor (ERR)) (transports arginine, lysine and ornithine; Na+-independent) from Mus musculus (Mouse)
RF|NP_031539.3 high affinity cationic amino acid transporter 1 from Mus musculus
PFams: AA_permease_2, AA_permease, AA_permease_C
622 amino acids: PaperBLAST, CDD, Compare to cluster