GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to amaD

Finding the characterized proteins for amaD (D-lysine oxidase) in L-lysine catabolism

Or see clustering for step amaD

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of amaD

Fetched 19 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 5 other characterized sequences. (Found 24 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for amaD.)

GLYOX_BACLI / S5FMM4 Glycine oxidase; GO; BliGO; EC 1.4.3.19 from Bacillus licheniformis
S5FMM4 glycine oxidase (EC 1.4.3.19) from Bacillus licheniformis
PFams: DAO, NAD_binding_8
369 amino acids: PaperBLAST, CDD, SwissProt::S5FMM4
62% identical to

O31616 glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis (strain 168)
GLYOX_BACSU / O31616 Glycine oxidase; GO; EC 1.4.3.19 from Bacillus subtilis (strain 168)
O31616 glycine oxidase (EC 1.4.3.19) from Bacillus subtilis
PFams: DAO, NAD_binding_8
369 amino acids: PaperBLAST, CDD

A3KCL7 D-aspartate oxidase subunit (EC 1.4.3.15) from Sus scrofa
A3KCL7 D-aspartate oxidase (EC 1.4.3.1) from Sus scrofa
PFams: DAO
341 amino acids: PaperBLAST, CDD, BRENDA::A3KCL7
41% identical to

P18894 D-amino-acid oxidase (EC 1.4.3.3) from Mus musculus
PFams: DAO
345 amino acids: PaperBLAST, CDD

D3ZDM7 D-aspartate oxidase (EC 1.4.3.1) from Rattus norvegicus
PFams: DAO
341 amino acids: PaperBLAST, CDD, BRENDA::D3ZDM7
41% identical to

P18894 D-amino-acid oxidase (EC 1.4.3.3) from Mus musculus
PFams: DAO
345 amino acids: PaperBLAST, CDD

Q0E9Q7 D-aspartate oxidase (EC 1.4.3.1) from Mus musculus
PFams: DAO
341 amino acids: PaperBLAST, CDD, BRENDA::Q0E9Q7
40% identical to

P18894 D-amino-acid oxidase (EC 1.4.3.3) from Mus musculus
PFams: DAO
345 amino acids: PaperBLAST, CDD

Q99489 D-aspartate oxidase (EC 1.4.3.1) from Homo sapiens
PFams: DAO
341 amino acids: PaperBLAST, CDD, BRENDA::Q99489
40% identical to

P18894 D-amino-acid oxidase (EC 1.4.3.3) from Mus musculus
PFams: DAO
345 amino acids: PaperBLAST, CDD