Other Characterized Proteins Similar to cadA

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to cadA

Finding the characterized proteins for cadA (lysine decarboxylase) in L-lysine catabolism

Or see clustering for step cadA

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of cadA

Curated proteins or TIGRFams with EC 4.1.1.18
Ignore hits to A0A0H3H393 when looking for 'other' hits (lysine decarboxylase (EC 4.1.1.18))
Comment: A0A0H3H393 is very similar to E. coli diaminopimelate decarboxylase and could not access the paper about it, so do not trust it.

Fetched 11 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 22 other characterized sequences. (Found 33 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for cadA.)

LOG3_ARATH / Q8L8B8 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3; Protein LONELY GUY 3; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
215 amino acids: PaperBLAST, CDD, SwissProt::Q8L8B8
88% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG1_ARATH / Q8RUN2 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1; Protein LONELY GUY 1; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
213 amino acids: PaperBLAST, CDD, SwissProt::Q8RUN2
85% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG4_ARATH / Q9LFH3 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4; Protein LONELY GUY 4; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
215 amino acids: PaperBLAST, CDD, SwissProt::Q9LFH3
87% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL6_ORYSJ / Q0JBP5 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6; Protein LONELY GUY-like 6; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
250 amino acids: PaperBLAST, CDD, SwissProt::Q0JBP5
83% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGLA_ORYSJ / Q7XDB8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10; Protein LONELY GUY-like 10; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
204 amino acids: PaperBLAST, CDD, SwissProt::Q7XDB8
84% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG7_ARATH / Q8GW29 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7; Protein LONELY GUY 7; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
217 amino acids: PaperBLAST, CDD, SwissProt::Q8GW29
81% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL3_ORYSJ / Q8H7U8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3; Protein LONELY GUY-like 3; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
211 amino acids: PaperBLAST, CDD, SwissProt::Q8H7U8
80% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL8_ORYSJ / Q0DFG8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL8; Protein LONELY GUY-like 8; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
266 amino acids: PaperBLAST, CDD, SwissProt::Q0DFG8
77% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

Q5ZC82 trans-zeatin riboside monophosphate phosphoribohydrolase from Oryza sativa subsp. japonica
LOG_ORYSJ / Q5ZC82 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; Protein LONELY GUY; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
242 amino acids: PaperBLAST, CDD, SwissProt::Q5ZC82
76% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG5_ARATH / Q8LBB7 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5; Protein LONELY GUY 5; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
228 amino acids: PaperBLAST, CDD, SwissProt::Q8LBB7
72% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL5_ORYSJ / Q84M85 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL5; Protein LONELY GUY-like 5; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
246 amino acids: PaperBLAST, CDD, SwissProt::Q84M85
76% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG2_ARATH / Q5BPS0 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2; Protein LONELY GUY 2; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
213 amino acids: PaperBLAST, CDD, SwissProt::Q5BPS0
72% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOG8_ARATH / Q84MC2 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8; LOG family protein At5g11950; Protein LONELY GUY 8; EC 3.2.2.n1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: LDcluster4, Lysine_decarbox
216 amino acids: PaperBLAST, CDD, SwissProt::Q84MC2
67% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL9_ORYSJ / B7E7M8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL9; Protein LONELY GUY-like 9; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
227 amino acids: PaperBLAST, CDD, SwissProt::B7E7M8
72% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL1_ORYSJ / Q8LR50 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1; Protein LONELY GUY-like 1; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
223 amino acids: PaperBLAST, CDD, SwissProt::Q8LR50
66% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGL7_ORYSJ / Q5TKP8 Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL7; Protein LONELY GUY-like 7; EC 3.2.2.n1 from Oryza sativa subsp. japonica (Rice)
PFams: LDcluster4, Lysine_decarbox
223 amino acids: PaperBLAST, CDD, SwissProt::Q5TKP8
64% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

LOGH_PSEAE / P48636 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; AMP nucleosidase; PaLOG; EC 3.2.2.n1; EC 3.2.2.4 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: LDcluster4, Lysine_decarbox
195 amino acids: PaperBLAST, CDD, SwissProt::P48636
47% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD

Q9Z3R1 L-2,4-diaminobutyrate decarboxylase (EC 4.1.1.86) from Rhizobium meliloti (strain 1021)
PFams: Pyridoxal_deC, Beta_elim_lyase, Aminotran_5
495 amino acids: PaperBLAST, CDD, metacyc::MONOMER-15539
42% identical to

Q9L072 L-lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9L072 lysine decarboxylase (EC 4.1.1.18) from Streptomyces coelicolor
PFams: Pyridoxal_deC, Beta_elim_lyase, Aminotran_5, SepSecS
480 amino acids: PaperBLAST, CDD

b4117 arginine decarboxylase, degradative (EC 4.1.1.19) from Escherichia coli K-12 substr. MG1655
P28629 arginine decarboxylase, degradative (EC 4.1.1.19) from Escherichia coli (strain K12)
P28629 arginine decarboxylase (EC 4.1.1.19) from Escherichia coli
GI|145339 biodegradative arginine decarboxylase; EC 4.1.1.19 from Escherichia coli K12
PFams: OKR_DC_1_N, OKR_DC_1, Pyridoxal_deC, OKR_DC_1_C
755 amino acids: PaperBLAST, CDD, BRENDA::P28629
40% identical to

LDCA_PSEAE / Q9I2S7 Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: OKR_DC_1_N, OKR_DC_1, OKR_DC_1_C
751 amino acids: PaperBLAST, CDD

E8X9U7 arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica subsp. enterica serovar Typhimurium
PFams: OKR_DC_1_N, OKR_DC_1, OKR_DC_1_C
756 amino acids: PaperBLAST, CDD, BRENDA::E8X9U7
40% identical to

Q3M985 diaminobutyrate decarboxylase (EC 4.1.1.86) from Trichormus variabilis
PFams: Pyridoxal_deC, Beta_elim_lyase
522 amino acids: PaperBLAST, CDD, BRENDA::Q3M985
40% identical to

LOGH_RHOFA / P46378 Cytokinin riboside 5'-monophosphate phosphoribohydrolase; LOG family protein ORF6 in fasciation locus; EC 3.2.2.n1 from Rhodococcus fascians
PFams: LDcluster4, Lysine_decarbox
198 amino acids: PaperBLAST, CDD, SwissProt::P46378
47% identical to

A0A2Z4EVE5 lysine decarboxylase (EC 4.1.1.18) from Morus alba
PFams: LDcluster4, Lysine_decarbox
218 amino acids: PaperBLAST, CDD