GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to davA

Finding the characterized proteins for davA (5-aminovaleramidase) in L-lysine catabolism

Or see clustering for step davA

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of davA

Fetched 6 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 8 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for davA.)

A0A088BHP3 aryl-acylamidase (EC 3.5.1.13); amidase (EC 3.5.1.4) from Streptomyces sp.
PFams: CN_hydrolase
267 amino acids: PaperBLAST, CDD, BRENDA::A0A088BHP3
44% identical to

B3IVI7 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD

RSAM_PSESP / Q75SP7 (R)-stereoselective amidase; EC 3.5.1.100 from Pseudomonas sp.
Q75SP7 (R)-amidase (EC 3.5.1.100) from Pseudomonas sp.
Q75SP7 (R)-amidase (EC 3.5.1.100) from Pseudomonas sp.
PFams: CN_hydrolase
274 amino acids: PaperBLAST, CDD, SwissProt::Q75SP7
40% identical to

B3IVI7 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD