Clusters of Characterized Proteins

Clustering the characterized proteins for davA (5-aminovaleramidase) in L-lysine catabolism

Or see other characterized proteins similar to davA

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of davA

• Curated proteins or TIGRFams with EC 3.5.1.30

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Pseudomonas fluorescens

PfGW456L13_1170 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens GW456-L13
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)

Pf1N1B4_2504 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N1B4
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)

AO353_07425 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2E3
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)

AO356_14225 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2C3
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)

Pf6N2E2_4777 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2E2
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas putida

B3IVI7 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida
PFams: CN_hydrolase
264 amino acids: PaperBLAST, CDD (Cluster 1)