Other Characterized Proteins Similar to dpkA

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to dpkA

Finding the characterized proteins for dpkA (1-piperideine-2-carboxylate reductase) in L-lysine catabolism

Or see clustering for step dpkA

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of dpkA

Curated proteins or TIGRFams with EC 1.5.1.1
Curated proteins or TIGRFams with EC 1.5.1.21

Fetched 10 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 7 other characterized sequences. (Found 17 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for dpkA.)

PYCR2_BURCM / Q0B953 Delta(1)-pyrroline-2-carboxylate reductase 2; Pyr2C reductase 2; Proline ketimine reductase 2; EC 1.5.1.49 from Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
PFams: OCD_Mu_crystall
311 amino acids: PaperBLAST, CDD, SwissProt::Q0B953
90% identical to

V5YW53 Δ¹-pyrroline-2-carboxylate reductase subunit (EC 1.5.1.49) from Azospirillum brasilense
PY2CR_AZOBR / V5YW53 Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; EC 1.5.1.1 from Azospirillum brasilense
V5YW53 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] (EC 1.5.1.1) from Azospirillum brasilense
PFams: OCD_Mu_crystall
311 amino acids: PaperBLAST, CDD

PYCR1_BURM1 / A9AKH1 Delta(1)-pyrroline-2-carboxylate reductase 1; Pyr2C reductase 1; Proline ketimine reductase 1; EC 1.5.1.49 from Burkholderia multivorans (strain ATCC 17616 / 249)
PFams: OCD_Mu_crystall
310 amino acids: PaperBLAST, CDD, SwissProt::A9AKH1
87% identical to

PY2CR_PSEF5 / Q4KGT8 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
PFams: Ldh_2
336 amino acids: PaperBLAST, CDD, SwissProt::Q4KGT8
61% identical to

PY2CR_PSEAE / Q9I492 Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase; Pyr2C/Pip2C reductase; Delta(1)-pyrroline-(4S)-hydroxy-2-carboxylate reductase; Pyr4SH2C reductase; Proline ketimine reductase; EC 1.5.1.21; EC 1.5.1.- from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I492 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase (NADPH) (EC 1.5.1.21) from Pseudomonas aeruginosa
PFams: Ldh_2
334 amino acids: PaperBLAST, CDD

PYCR1_BURCM / Q0B9S2 Delta(1)-pyrroline-2-carboxylate reductase 1; Pyr2C reductase 1; Proline ketimine reductase 1; EC 1.5.1.49 from Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia cepacia (strain AMMD))
PFams: Ldh_2
340 amino acids: PaperBLAST, CDD, SwissProt::Q0B9S2
59% identical to

PYCR2_BURM1 / A9ALD3 Delta(1)-pyrroline-2-carboxylate reductase 2; Pyr2C reductase 2; Proline ketimine reductase 2; EC 1.5.1.49 from Burkholderia multivorans (strain ATCC 17616 / 249)
PFams: Ldh_2
340 amino acids: PaperBLAST, CDD, SwissProt::A9ALD3
59% identical to

PY2CR_STAND / D7A0Y0 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; EC 1.5.1.49 from Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113)
PFams: Ldh_2
341 amino acids: PaperBLAST, CDD, SwissProt::D7A0Y0
51% identical to

PY2CR_AGRFC / Q7CVK1 Delta(1)-pyrroline-2-carboxylate reductase; Pyr2C reductase; Proline ketimine reductase; EC 1.5.1.49 from Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
PFams: Ldh_2
345 amino acids: PaperBLAST, CDD, SwissProt::Q7CVK1
51% identical to