GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for etfA (butanoyl-CoA dehydrogenase (NAD+, ferredoxin), etfA subunit) in L-lysine catabolism

Or see other characterized proteins similar to etfA

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of etfA

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 336-340 amino acids (heteromeric)

The first sequence in each cluster is the seed.

D2RIQ3 butanoyl-CoA dehydrogenase (NAD+, ferredoxin) (subunit 2/3) (EC; short-chain acyl-CoA dehydrogenase (EC from Acidaminococcus fermentans
PFams: ETF, ETF_alpha
Heteromeric, 340 amino acids: PaperBLAST, CDD, Compare to cluster

Q18AQ5 butanoyl-CoA dehydrogenase (NAD+, ferredoxin) (subunit 1/3) (EC from Clostridioides difficile
PFams: ETF, ETF_alpha
Heteromeric, 336 amino acids: PaperBLAST, CDD, Compare to cluster