GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for patA (cadaverine aminotransferase) in L-lysine catabolism

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Definition of patA

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/1 heteromeric)

b3073 putrescine aminotransferase (EC from Escherichia coli K-12 substr. MG1655
PAT_ECOLI / P42588 Putrescine aminotransferase; PAT; PATase; Cadaverine transaminase; Putrescine transaminase; Putrescine--2-oxoglutaric acid transaminase; Putrescine:2-OG aminotransferase; EC; EC 2.6.1.- from Escherichia coli (strain K12)
P42588 putrescine-2-oxoglutarate transaminase (EC from Escherichia coli
P42588 putrescine aminotransferase (EC from Escherichia coli (strain K12)
PFams: Aminotran_3
459 amino acids: PaperBLAST, CDD