Clusters of Characterized Proteins

Clustering the characterized proteins for patD (5-aminopentanal dehydrogenase) in L-lysine catabolism

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Definition of patD

• Curated sequence P77674: aminobutyraldehyde dehydrogenase (EC 1.2.1.19). Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.-. γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19). γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19)
• Ignore hits to items matching 1.2.1.19 when looking for 'other' hits
• Comment: E. coli 4-aminobutanal dehydrogenase (patD, P77674) is known to carry out this reaction. It seems likely that other members of EC 1.2.1.19 (4-aminobutanal dehydrogenase) would perform it as well.

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (0/1 heteromeric)

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
PFams: Aldedh
474 amino acids: PaperBLAST, CDD