GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to patD

Finding the characterized proteins for patD (5-aminopentanal dehydrogenase) in L-lysine catabolism

Or see clustering for step patD

Or see all steps for L-lysine catabolism

Or cluster curated proteins matching a keyword

Definition of patD

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 12 other characterized sequences. (Found 13 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for patD.)

F8TW85 4-hydroxymuconic-semialdehyde dehydrogenase (EC 1.2.1.61) from Sphingomonas sp.
PFams: Aldedh
498 amino acids: PaperBLAST, CDD, BRENDA::F8TW85
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

V4GH04 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida
PFams: Aldedh
496 amino acids: PaperBLAST, CDD, BRENDA::V4GH04
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

D2STN3 4-hydroxymuconic-semialdehyde dehydrogenase (EC 1.2.1.61) from Pseudomonas sp. 1-7
PFams: Aldedh
487 amino acids: PaperBLAST, CDD, metacyc::MONOMER-17438
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

A3LNE3 NAD(P)+ L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
PFams: Aldedh
495 amino acids: PaperBLAST, CDD, metacyc::MONOMER-16244
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

C1I208 4-hydroxymuconic-semialdehyde dehydrogenase (EC 1.2.1.61) from Pseudomonas sp. WBC-3
C1I208 maleylacetate reductase (EC 1.3.1.32) from Pseudomonas sp. (strain WBC-3)
PFams: Aldedh
487 amino acids: PaperBLAST, CDD, metacyc::MONOMER-13029
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

CH_122876 aldehyde dehydrogenase from Candida albicans
PFams: Aldedh
499 amino acids: PaperBLAST, CDD, CharProtDB::CH_122876
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

ALDH4_BACSU / O34660 Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis (strain 168)
PFams: Aldedh
495 amino acids: PaperBLAST, CDD, SwissProt::O34660
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

O33455 cumic aldehyde dehydrogenase (EC 1.2.1.29) from Pseudomonas putida
PFams: Aldedh
494 amino acids: PaperBLAST, CDD, metacyc::MONOMER-324
41% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

STYD_PSEFL / O06837 Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
O06837 phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens
PFams: Aldedh
502 amino acids: PaperBLAST, CDD, SwissProt::O06837
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

ALDH1_TANCI / A0A2I7G3B0 Aldehyde dehydrogenase 1; TcALDH1; Trans-chrysanthemic acid synthase; EC 1.2.1.5; EC 1.2.1.- from Tanacetum cinerariifolium (Dalmatian daisy) (Chrysanthemum cinerariifolium)
A0A2I7G3B0 trans-chrysanthemal dehydrogenase from Tanacetum cinerariifolium
PFams: Aldedh
499 amino acids: PaperBLAST, CDD, SwissProt::A0A2I7G3B0
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

ALDH1_ARTAN / C5I9X1 Aldehyde dehydrogenase 1; Artemisinic aldehyde oxidase; Artemisinate synthase; Dihydroartemisinic aldehyde oxidase; EC 1.2.1.- from Artemisia annua (Sweet wormwood)
PFams: Aldedh
499 amino acids: PaperBLAST, CDD, SwissProt::C5I9X1
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD

RF|XP_658158.1 aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, CharProtDB::CH_007936
40% identical to

b1444 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli K-12 substr. MG1655
ABDH_ECOLI / P77674 Gamma-aminobutyraldehyde dehydrogenase; ABALDH; 1-pyrroline dehydrogenase; 4-aminobutanal dehydrogenase; 5-aminopentanal dehydrogenase; EC 1.2.1.19; EC 1.2.1.- from Escherichia coli (strain K12)
P77674 aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli
P77674 γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) from Escherichia coli (strain K12)
PFams: Aldedh
474 amino acids: PaperBLAST, CDD