GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for aglK (maltose ABC transporter, ATPase component AglK) in D-maltose catabolism

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Definition of aglK

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 362-373 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

A8LLL2 Maltose/maltodextrin import ATP-binding protein; EC=
373 amino acids: PaperBLAST, CDD, Compare to cluster

TC 3.A.1.1.8 / Q9Z3R9 AglK aka R00699 aka SMC03065, component of Sucrose/maltose/trehalose porter (sucrose-inducible) from Rhizobium meliloti (Sinorhizobium meliloti)
SMc03065 ABC transporter for D-Maltose and D-Trehalose, ATPase component from Sinorhizobium meliloti 1021
PFams: ABC_tran, OB_MalK, TOBE_2, TOBE
Heteromeric, 362 amino acids: PaperBLAST, CDD, Compare to cluster