Other Characterized Proteins Similar to mtlG

GapMind for catabolism of small carbon sources

Finding the characterized proteins for mtlG (polyol ABC transporter, permease component 2 (MtlG/SmoG)) in D-mannitol catabolism

Or see clustering for step mtlG

Definition of mtlG

Curated sequence O30493: MtlG, component of The polyol (mannitol, glucitol (sorbitol), arabitol (arabinitol; lyxitol)) uptake porter, MtlEFGK
Curated sequence GFF2491: ABC transporter for D-Mannitol, D-Mannose, and D-Sorbitol, permease component 1
Curated sequence PfGW456L13_3040: ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 1
Curated sequence AO353_25890: ABC transporter for D-mannitol and D-mannose, permease component 2
Ignore hits to Pf6N2E2_1961 when looking for 'other' hits (ABC transporter for D-sorbitol, permease component 2)
Ignore hits to AO356_00015 when looking for 'other' hits (ABC transporter for D-Sorbitol, permease component 1)
Curated sequence O30833: SmoG, component of Hexitol (glucitol; mannitol) porter

Fetched 5 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 11 hits including self hits.)

Removing ignored items reduces this to 4 close sequences.

(Sequences that are similar to these will not be high-confidence candidates for mtlG.)

PGA1_c13190 ABC transporter for D-Sorbitol, permease component 1 from Phaeobacter inhibens BS107
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD, reanno::Phaeo:GFF1303
73% identical to

TC 3.A.1.1.5 / O30833 SmoG, component of Hexitol (glucitol; mannitol) porter from Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

BPHYT_RS16105 ABC transporter for D-Sorbitol, permease component 1 from Burkholderia phytofirmans PsJN
PFams: BPD_transp_1
Heteromeric, 291 amino acids: PaperBLAST, CDD, reanno::BFirm:BPHYT_RS16105
66% identical to

AO353_25890 ABC transporter for D-mannitol and D-mannose, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

Ac3H11_2942 ABC transporter for D-Sorbitol, permease component 1 from Acidovorax sp. GW101-3H11
PFams: BPD_transp_1
Heteromeric, 279 amino acids: PaperBLAST, CDD, reanno::acidovorax_3H11:Ac3H11_2942
62% identical to

AO353_25890 ABC transporter for D-mannitol and D-mannose, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

Dshi_0549 ABC transporter for Xylitol, permease component 2 from Dinoroseobacter shibae DFL-12
PFams: BPD_transp_1
Heteromeric, 272 amino acids: PaperBLAST, CDD, reanno::Dino:3607127
41% identical to

AO353_25890 ABC transporter for D-mannitol and D-mannose, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

(Sequences that are similar to these will still be high-confidence candidates for mtlG.)

Pf6N2E2_1961 ABC transporter for D-sorbitol, permease component 2 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 277 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_1961
92% identical to

PfGW456L13_3040 ABC transporter for D-Mannitol, D-Mannose, and D-Mannose, permease component 1 from Pseudomonas fluorescens GW456-L13
PFams: BPD_transp_1
Heteromeric, 276 amino acids: PaperBLAST, CDD

AO356_00015 ABC transporter for D-Sorbitol, permease component 1 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 277 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_00015
92% identical to