GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for STP6 (mannose:H+ symporter) in D-mannose catabolism

Or see other characterized proteins similar to STP6

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Or cluster curated proteins matching a keyword

Definition of STP6

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 507-514 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

STP6_ARATH / Q9SFG0 Sugar transport protein 6; Hexose transporter 6 from Arabidopsis thaliana (Mouse-ear cress)
TC 2.A.1.1.56 / Q9SFG0 High affinity monosaccharide (KM ≈ 20 µM):H+ symporter, Stp6 (takes up glucose, 3-O-methylglucose, mannose, fructose, galactose and to a lesser extent, xylose and ribulose. from Arabidopsis thaliana (Mouse-ear cress)
RF|NP_187247.1 sugar transport protein 6 from Arabidopsis thaliana
PFams: Sugar_tr, MFS_1
507 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.1.1.124 / Q9LT15 The high affinity sugar:H+ symporter (sugar uptake) porter of 514 aas and 12 TMSs, STP10. It transports glucose, galactose and mannose, and is therefore a hexose transporter (Rottmann et al. 2016). The 2.4 from Arabidopsis thaliana
PFams: MFS_1, Sugar_tr
514 amino acids: PaperBLAST, CDD, Compare to cluster