GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for gluP (mannose:Na+ symporter) in D-mannose catabolism

Or see other characterized proteins similar to gluP

Or see all steps for D-mannose catabolism

Or cluster curated proteins matching a keyword

Definition of gluP

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 407-413 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

TC 2.A.1.7.7 / O25788 The Na+-dependent sugar transporter, HP1174 (transports glucose, galactose, mannose and 2-deoxyglucose (Psakis et al. 2009)). (most similar to 2.A.1.7.2; 49% identity) from Helicobacter pylori
PFams: MFS_1
407 amino acids: PaperBLAST, CDD, Compare to cluster

Sama_0562 D-mannitol and D-mannose transporter (MFS superfamily) from Shewanella amazonensis SB2B
PFams: MFS_1
413 amino acids: PaperBLAST, CDD, Compare to cluster