GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to man-isomerase

Finding the characterized proteins for man-isomerase (D-mannose isomerase) in D-mannose catabolism

Or see clustering for step man-isomerase

Or see all steps for D-mannose catabolism

Or cluster curated proteins matching a keyword

Definition of man-isomerase

Fetched 7 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 4 other characterized sequences. (Found 11 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for man-isomerase.)

SQUS_SALTY / Q8ZKT7 Sulfoquinovose isomerase; SQ isomerase; EC 5.3.1.31 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: GlcNAc_2-epim
413 amino acids: PaperBLAST, CDD, SwissProt::Q8ZKT7
92% identical to

b3880 sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli K-12 substr. MG1655
SQUS_ECOLI / P32140 Sulfoquinovose isomerase; SQ isomerase; EC 5.3.1.31 from Escherichia coli (strain K12)
P32140 sulfoquinovose isomerase (EC 5.3.1.31; EC 5.3.1.7) from Escherichia coli (strain K12)
RF|NP_418316 uncharacterized sugar isomerase yihS from Escherichia coli K12
PFams: GlcNAc_2-epim
413 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for man-isomerase.)

Pf1N1B4_597 Isomerase for D-mannose and D-mannitol catabolism (probably D-mannose-6-phosphate or D-mannose isomerase) from Pseudomonas fluorescens FW300-N1B4
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_597
76% identical to

PS417_22150 D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae WCS417
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD

AO353_03400 Isomerase for D-mannose and D-mannitol catabolism (probably D-mannose-6-phosphate isomerase or D-mannose isomerase) from Pseudomonas fluorescens FW300-N2E3
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_03400
74% identical to

PS417_22150 D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae WCS417
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD

AO356_05200 Isomerase for D-mannose and D-mannitol catabolism (probably D-mannose-6-phosphate isomerase or D-mannose isomerase) from Pseudomonas fluorescens FW300-N2C3
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_05200
74% identical to

PS417_22150 D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae WCS417
PFams: GlcNAc_2-epim
419 amino acids: PaperBLAST, CDD