GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for PS417_11885 (myo-inositol ABC transporter, substrate-binding component) in myo-inositol catabolism

Or see other characterized proteins similar to PS417_11885

Or see all steps for myo-inositol catabolism

Or cluster curated proteins matching a keyword

Definition of PS417_11885

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 308-309 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A0A0N9WNI6 Rhizopine-binding protein
308 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_11885 Inositol transport system sugar-binding protein from Pseudomonas simiae WCS417
PFams: Peripla_BP_4, Peripla_BP_1
309 amino acids: PaperBLAST, CDD, Compare to cluster