GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for PS417_11895 (myo-inositol ABC transporter, permease component) in myo-inositol catabolism

Or see other characterized proteins similar to PS417_11895

Or see all steps for myo-inositol catabolism

Or cluster curated proteins matching a keyword

Definition of PS417_11895

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 340-340 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

PS417_11895 Inositol transport system permease protein from Pseudomonas simiae WCS417
PFams: BPD_transp_2
340 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_21390 m-Inositol ABC transporter, permease component (iatP) from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_2
Heteromeric, 340 amino acids: PaperBLAST, CDD, Compare to cluster