GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for SMIT1 (myo-inositol:Na+ symporter) in myo-inositol catabolism

Or see other characterized proteins similar to SMIT1

Or see all steps for myo-inositol catabolism

Or cluster curated proteins matching a keyword

Definition of SMIT1

Fetched 7 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 673-718 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

SC5AB_RABIT / Q28728 Sodium/myo-inositol cotransporter 2; Na(+)/myo-inositol cotransporter 2; Sodium-dependent glucose cotransporter; Sodium/glucose cotransporter KST1; rKST1; Sodium/myo-inositol transporter 2; SMIT2; Solute carrier family 5 member 11 from Oryctolagus cuniculus (Rabbit)
PFams: SSF
674 amino acids: PaperBLAST, CDD, Compare to cluster

SC5AB_MOUSE / Q8K0E3 Sodium/myo-inositol cotransporter 2; Na(+)/myo-inositol cotransporter 2; Sodium-dependent glucose cotransporter; Sodium/glucose cotransporter KST1; Sodium/myo-inositol transporter 2; SMIT2; Solute carrier family 5 member 11 from Mus musculus (Mouse)
PFams: SSF
673 amino acids: PaperBLAST, CDD, Compare to cluster

SC5AB_HUMAN / Q8WWX8 Sodium/myo-inositol cotransporter 2; Na(+)/myo-inositol cotransporter 2; Sodium-dependent glucose cotransporter; Sodium/glucose cotransporter KST1; Sodium/myo-inositol transporter 2; SMIT2; Solute carrier family 5 member 11 from Homo sapiens (Human)
TC 2.A.21.3.6 / Q8WWX8 Myoinositol:Na+ symporter, SMIT2 (also transports D-chiro-inositol, D-glucose and D-xylose)
PFams: SSF
675 amino acids: PaperBLAST, CDD, Compare to cluster

SC5A3_MOUSE / Q9JKZ2 Sodium/myo-inositol cotransporter; Na(+)/myo-inositol cotransporter; Sodium/myo-inositol transporter 1; SMIT1; Solute carrier family 5 member 3 from Mus musculus (Mouse)
PFams: SSF
718 amino acids: PaperBLAST, CDD, Compare to cluster

SC5AB_RAT / Q9Z1F2 Sodium/myo-inositol cotransporter 2; Na(+)/myo-inositol cotransporter 2; Sodium-dependent glucose cotransporter; Sodium/glucose cotransporter KST1; rkST1; Sodium/myo-inositol transporter 2; SMIT2; Solute carrier family 5 member 11 from Rattus norvegicus (Rat)
PFams: SSF
673 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.21.3.5 / P31637 Myoinositol:Na+ symporter, SMIT1 from Canis familiaris (Dog)
PFams: SSF
718 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.21.3.14 / P53794 Sodium/myo-inositol cotransporter (Na(+)/myo-inositol cotransporter) (Sodium/myo-inositol transporter 1) (SMIT1) (Solute carrier family 5 member 3) from Homo sapiens
PFams: SSF
718 amino acids: PaperBLAST, CDD, Compare to cluster