GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for ibpA (myo-inositol ABC transporter, substrate-binding component IbpA) in myo-inositol catabolism

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Definition of ibpA

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.2.21 / B8H228 Inositol ABC transporter, periplasmic inositol-binding protein IbpA, component of The myoinositol (high affinity)/ D-ribose (low affinity) transporter IatP/IatA/IbpA. The structure of IbpA with myoinositol bound has been solved from Caulobacter crescentus (strain NA1000 / CB15N)
PFams: Peripla_BP_4, Peripla_BP_1, Peripla_BP_6, Peripla_BP_3
Heteromeric, 326 amino acids: PaperBLAST, CDD