GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for bcrA (ATP-dependent benzoyl-CoA reductase, alpha subunit) in phenylacetate catabolism

Or see other characterized proteins similar to bcrA

Or see all steps for phenylacetate catabolism

Or cluster curated proteins matching a keyword

Definition of bcrA

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 437-438 amino acids (heteromeric)

The first sequence in each cluster is the seed.

O07462 BadF (EC 1.3.7.8) from Rhodopseudomonas palustris
O07462 benzoyl-CoA reductase (EC 1.3.7.8) from Rhodopseudomonas palustris
PFams: BcrAD_BadFG
Heteromeric, 437 amino acids: PaperBLAST, CDD, Compare to cluster

O87876 benzoyl-CoA reductase α subunit (EC 1.3.7.8) from Thauera aromatica
BCRA_THAAR / O87876 Benzoyl-CoA reductase subunit A; 3-hydroxybenzoyl-CoA reductase subunit alpha; EC 1.3.7.8; EC 1.3.99.n1 from Thauera aromatica
O87876 benzoyl-CoA reductase (EC 1.3.7.8) from Thauera aromatica
PFams: BcrAD_BadFG
Heteromeric, 438 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

Q8VUG0 benzoyl-CoA reductase (EC 1.3.7.8) from Azoarcus evansii
PFams: BcrAD_BadFG
301 amino acids: PaperBLAST, CDD