GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for bcrD (ATP-dependent benzoyl-CoA reductase, delta subunit) in phenylacetate catabolism

Or see other characterized proteins similar to bcrD

Or see all steps for phenylacetate catabolism

Or cluster curated proteins matching a keyword

Definition of bcrD

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 269-282 amino acids (2/3 heteromeric)

The first sequence in each cluster is the seed.

Q8VUG1 benzoyl-CoA reductase (EC from Azoarcus evansii
PFams: BcrAD_BadFG
269 amino acids: PaperBLAST, CDD, Compare to cluster

O87877 benzoyl-CoA reductase δ subunit (EC from Thauera aromatica
BCRD_THAAR / O87877 Benzoyl-CoA reductase subunit D; 3-hydroxybenzoyl-CoA reductase subunit delta; EC; EC 1.3.99.n1 from Thauera aromatica
PFams: BcrAD_BadFG
Heteromeric, 282 amino acids: PaperBLAST, CDD, Compare to cluster

O07463 BadG (EC from Rhodopseudomonas palustris
O07463 benzoyl-CoA reductase (EC from Rhodopseudomonas palustris
PFams: BcrAD_BadFG
Heteromeric, 277 amino acids: PaperBLAST, CDD, Compare to cluster