GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to pimB

Finding the characterized proteins for pimB (3-oxopimeloyl-CoA:CoA acetyltransferase) in phenylacetate catabolism

Or see clustering for step pimB

Or see all steps for phenylacetate catabolism

Or cluster curated proteins matching a keyword

Definition of pimB

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 14 other characterized sequences. (Found 15 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for pimB.)

FADA_BACSU / O32177 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis (strain 168)
PFams: Thiolase_N, ketoacyl-synt, Thiolase_C
391 amino acids: PaperBLAST, CDD, SwissProt::O32177
45% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal (EC 2.3.1.16) from Arabidopsis thaliana
THIK2_ARATH / Q56WD9 3-ketoacyl-CoA thiolase 2, peroxisomal; Acetyl-CoA acyltransferase 2; Beta-ketothiolase 2; Peroxisomal 3-oxoacyl-CoA thiolase 2; Peroxisome defective protein 1; EC 2.3.1.16 from Arabidopsis thaliana (Mouse-ear cress)
Q56WD9 acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Arabidopsis thaliana
PFams: Thiolase_N, Thiolase_C
462 amino acids: PaperBLAST, CDD, BRENDA::Q56WD9
43% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

b1397 β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli K-12 substr. MG1655
P0C7L2 β-ketoadipyl-CoA thiolase (EC 2.3.1.223; EC 2.3.1.174) from Escherichia coli (strain K12)
PAAJ_ECOLI / P0C7L2 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase; EC 2.3.1.174; EC 2.3.1.223 from Escherichia coli (strain K12)
PFams: Thiolase_N, Thiolase_C
401 amino acids: PaperBLAST, CDD, SwissProt::P0C7L2
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

THIK5_ARATH / Q570C8 3-ketoacyl-CoA thiolase 5, peroxisomal; Acetyl-CoA acyltransferase 5; Beta-ketothiolase 5; Peroxisomal 3-oxoacyl-CoA thiolase 5; EC 2.3.1.16 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Thiolase_N, Thiolase_C
457 amino acids: PaperBLAST, CDD, SwissProt::Q570C8
43% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

THIKB_RAT / P07871 3-ketoacyl-CoA thiolase B, peroxisomal; Acetyl-CoA acyltransferase B; Beta-ketothiolase B; Peroxisomal 3-oxoacyl-CoA thiolase B; EC 2.3.1.155; EC 2.3.1.16; EC 2.3.1.9 from Rattus norvegicus (Rat)
PFams: Thiolase_N, Thiolase_C
424 amino acids: PaperBLAST, CDD, SwissProt::P07871
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

THIKB_MOUSE / Q8VCH0 3-ketoacyl-CoA thiolase B, peroxisomal; Acetyl-CoA acyltransferase B; Beta-ketothiolase B; Peroxisomal 3-oxoacyl-CoA thiolase B; EC 2.3.1.155; EC 2.3.1.16; EC 2.3.1.9 from Mus musculus (Mouse)
Q8VCH0 acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus
PFams: Thiolase_N, Thiolase_C
424 amino acids: PaperBLAST, CDD, BRENDA::Q8VCH0
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

THIKA_MOUSE / Q921H8 3-ketoacyl-CoA thiolase A, peroxisomal; Acetyl-CoA acyltransferase A; Beta-ketothiolase A; Peroxisomal 3-oxoacyl-CoA thiolase A; EC 2.3.1.16 from Mus musculus (Mouse)
Q921H8 acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus
PFams: Thiolase_N, Thiolase_C
424 amino acids: PaperBLAST, CDD, BRENDA::Q921H8
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

THIK1_ARATH / Q8LF48 3-ketoacyl-CoA thiolase 1, peroxisomal; Acetyl-CoA acyltransferase 1; Beta-ketothiolase 1; Peroxisomal 3-oxoacyl-CoA thiolase 1; EC 2.3.1.16 from Arabidopsis thaliana (Mouse-ear cress)
PFams: Thiolase_N, Thiolase_C
443 amino acids: PaperBLAST, CDD, SwissProt::Q8LF48
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

P09110 3-ketoacyl-CoA thiolase, peroxisomal (EC 2.3.1.223; EC 2.3.1.16) from Homo sapiens
THIK_HUMAN / P09110 3-ketoacyl-CoA thiolase, peroxisomal; Acetyl-CoA acyltransferase; Beta-ketothiolase; Peroxisomal 3-oxoacyl-CoA thiolase; EC 2.3.1.16 from Homo sapiens (Human)
PFams: Thiolase_N, Thiolase_C
424 amino acids: PaperBLAST, CDD, SwissProt::P09110
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

Q6W6X6 acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Helianthus annuus
PFams: Thiolase_N, Thiolase_C
449 amino acids: PaperBLAST, CDD, BRENDA::Q6W6X6
42% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

b2224 acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli K-12 substr. MG1655
P76461 acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli (strain K12)
PFams: Thiolase_N, Thiolase_C
394 amino acids: PaperBLAST, CDD, ecocyc::ACETYL-COA-ACETYLTRANSFER-MONOMER
41% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

Q88L01 FadA (EC 2.3.1.16) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
PFams: Thiolase_N, ketoacyl-synt, Thiolase_C
391 amino acids: PaperBLAST, CDD, metacyc::G1G01-2278-MONOMER
40% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

P14611 acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
THIL_CUPNH / P14611 Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)
PFams: Thiolase_N, ketoacyl-synt, Thiolase_C
393 amino acids: PaperBLAST, CDD, SwissProt::P14611
41% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD

HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Marinobacter adhaerens HP15
PFams: Thiolase_N, ketoacyl-synt, Thiolase_C
374 amino acids: PaperBLAST, CDD, reanno::Marino:GFF1551
40% identical to

Q6N3H9 3-oxopimeloyl-CoA:CoA acetyltransferase from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Thiolase_N, Thiolase_C
395 amino acids: PaperBLAST, CDD