GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for PAH (phenylalanine 4-monooxygenase) in L-phenylalanine catabolism

Or see other characterized proteins similar to PAH

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Definition of PAH

Fetched 16 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 14 of these sequences

Found 2 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 261-297 amino acids (not heteromeric)

Ac3H11_1847 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Acidovorax sp. GW101-3H11
PFams: Biopterin_H
290 amino acids: PaperBLAST, CDD, Compare to cluster

P30967 phenylalanine 4-monooxygenase (EC 1.14.16.1) from Chromobacterium violaceum
P30967 phenylalanine hydroxylase (EC 1.14.16.1) from Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
PFams: Biopterin_H
297 amino acids: PaperBLAST, CDD, Compare to cluster

Q47XN7 phenylalanine 4-monooxygenase (EC 1.14.16.1) from Colwellia psychrerythraea
PFams: Biopterin_H
267 amino acids: PaperBLAST, CDD, Compare to cluster

SO1666 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Shewanella oneidensis MR-1
PFams: Biopterin_H
271 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_4394 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens GW456-L13
PFams: Biopterin_H
261 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_18585 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens FW300-N2E3
PFams: Biopterin_H
263 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_03975 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens FW300-N2C3
PFams: Biopterin_H
261 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_2630 Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens FW300-N2E2
PFams: Biopterin_H
261 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 441-457 amino acids (not heteromeric)

PH4H_HUMAN / P00439 Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Homo sapiens (Human)
P00439 phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens
P00439 phenylalanine hydroxylase subunit (EC 1.14.16.1) from Homo sapiens
PFams: ACT, Biopterin_H
452 amino acids: PaperBLAST, CDD, Compare to cluster

PH4H_RAT / P04176 Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Rattus norvegicus (Rat)
P04176 phenylalanine 4-monooxygenase (EC 1.14.16.1) from Rattus norvegicus
PFams: ACT, Biopterin_H
453 amino acids: PaperBLAST, CDD, Compare to cluster

Q8TEY0 phenylalanine 4-monooxygenase (EC 1.14.16.1) from Homo sapiens
PFams: ACT, Biopterin_H
452 amino acids: PaperBLAST, CDD, Compare to cluster

PH4H_MOUSE / P16331 Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; EC 1.14.16.1 from Mus musculus (Mouse)
PFams: ACT, Biopterin_H
453 amino acids: PaperBLAST, CDD, Compare to cluster

PH4H_CAEEL / P90925 Phenylalanine-4-hydroxylase; PAH; Biogenic amine synthesis protein 2; Phe-4-monooxygenase; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Caenorhabditis elegans
PFams: ACT, Biopterin_H
457 amino acids: PaperBLAST, CDD, Compare to cluster

PH4H_DICDI / Q54XS1 Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum (Slime mold)
PFams: Biopterin_H
441 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

A8HQD7 phenylalanine hydroxylase (EC 1.14.16.1) from Chlamydomonas reinhardtii
PFams: Biopterin_H
361 amino acids: PaperBLAST, CDD

E5KBU4 phenylalanine hydroxylase (EC 1.14.16.1) from Physcomitrella patens subsp. patens
PFams: Biopterin_H
394 amino acids: PaperBLAST, CDD