GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to bamH

Finding the characterized proteins for bamH (class II benzoyl-CoA reductase, BamH subunit) in L-phenylalanine catabolism

Or see clustering for step bamH

Or see all steps for L-phenylalanine catabolism

Or cluster curated proteins matching a keyword

Definition of bamH

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 5 other characterized sequences. (Found 5 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for bamH.)

Q8RBC9 NADH-dependent hydrogenase β subunit (EC 1.12.1.2) from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
PFams: 2Fe-2S_thioredx, Complex1_51K, SLBB, NADH_4Fe-4S, Fer4, Fer4_6, Fer4_7, Fer4_9, Fer4, Fer4_6
596 amino acids: PaperBLAST, CDD, metacyc::MONOMER-16339
56% identical to

Q39TW5 Benzoyl-CoA reductase electron transfer protein, putative
635 amino acids: PaperBLAST, CDD

K0B622 formate dehydrogenase (NAD+, ferredoxin) (subunit 2/4) (EC 1.17.1.11) from Gottschalkia acidurici
PFams: 2Fe-2S_thioredx, Complex1_51K, SLBB, NADH_4Fe-4S, Fer4_7, Fer4_9, Fer4
Heteromeric, 626 amino acids: PaperBLAST, CDD, BRENDA::K0B622
53% identical to

Q39TW5 Benzoyl-CoA reductase electron transfer protein, putative
635 amino acids: PaperBLAST, CDD

TC 3.D.1.5.1 / Q74GA3 NuoF aka GSU0343, component of Proton-translocating NADH dehydrogenase I from Geobacter sulfurreducens
PFams: Complex1_51K, SLBB, NADH_4Fe-4S, Fer4, Fer4_10, Fer4_9, Fer4
Heteromeric, 591 amino acids: PaperBLAST, CDD, TCDB::Q74GA3
49% identical to

Q39TW5 Benzoyl-CoA reductase electron transfer protein, putative
635 amino acids: PaperBLAST, CDD

O52682 hydrogenase β subunit (EC 1.12.1.4) from Thermotoga maritima
PFams: 2Fe-2S_thioredx, Complex1_51K, NADH_4Fe-4S, Fer4, Fer4_10, Fer4_21, Fer4_7, Fer4_9, Fer4
Heteromeric, 626 amino acids: PaperBLAST, CDD, metacyc::MONOMER-262
47% identical to

Q39TW5 Benzoyl-CoA reductase electron transfer protein, putative
635 amino acids: PaperBLAST, CDD

HNDC_DESFR / Q46507 NADP-reducing hydrogenase subunit HndC; Hydrogen dehydrogenase (NADP(+)); EC 1.12.1.3 from Desulfovibrio fructosivorans
PFams: Complex1_51K, NADH_4Fe-4S, Fer4, Fer4_10, Fer4_7, Fer4
Heteromeric, 490 amino acids: PaperBLAST, CDD, SwissProt::Q46507
51% identical to

Q39TW5 Benzoyl-CoA reductase electron transfer protein, putative
635 amino acids: PaperBLAST, CDD